mailsys_server/mailextract_01.py

import os
import sys
import numpy
import subprocess
import pandas as pd
import time

SOURCE_DIR = '/home/mc365/sources/'
STROAGE_DIR = '/hdd/'
LOG_EXTRACT = '/log_extract.txt'
#NOTE: CHANGE CFG, WEIGHT, .data
CFG_FILE = 'yolov4_7gpu.cfg'
WEIGHT_FILE = 'yolov4_7gpu_last.weights'
DATA_FILE = 'obj.data'
FRAME_COUNTER = 0
N_OF_FRAME = 1800

SURGEON_DIR = os.path.abspath(STROAGE_DIR+os.listdir('/hdd/')[0])
CALL_DEPTH = ['python3',SOURCE_DIR+'depthsensing.py', '-c', SOURCE_DIR+CFG_FILE, '-w', SOURCE_DIR+WEIGHT_FILE, '-m', SOURCE_DIR+DATA_FILE]
#print(SURGEON_DIR)
def extract_surgeon ():    
    svo1list = [file for file in os.listdir(os.path.abspath(SURGEON_DIR)) if file.endswith('1.svo')]
    svo1list= sorted(svo1list)
    del svo1list[-1]
    for svo in svo1list:
        REST_OF_CALL_DEPTH = ['-s',SURGEON_DIR+'/'+svo, '-o', SURGEON_DIR+'/'+svo[:5]+'.csv']
        subprocess.call(CALL_DEPTH+REST_OF_CALL_DEPTH)

def concat_csv():
    csv1list = [file for file in os.listdir(os.path.abspath(SURGEON_DIR)) if file.endswith('1.csv')]
    csv1list = sorted(csv1list)    
    fc = FRAME_COUNTER
    nf = N_OF_FRAME

    conc_df = pd.DataFrame(data={'x': [], 'y': [], 'z': [], 'frame': []})
    for csv in csv1list:
        df = pd.read_csv(os.path.join(SURGEON_DIR,csv), header=0)
        df['frame'] = df['frame'] + fc
        conc_df = pd.concat([conc_df,df])
        fc += nf
    conc_df.to_csv(os.path.join(SURGEON_DIR,'cam1.csv'), index=False)

def concat_csv_with_nms():
    csv1list = [file for file in os.listdir(os.path.abspath(SURGEON_DIR)) if file.endswith('1_nms.csv')]
    csv1list = sorted(csv1list)    
    fc = FRAME_COUNTER
    nf = N_OF_FRAME

    conc_df = pd.DataFrame(data={'x': [], 'y': [], 'z': [], 'nms':[],'frame': []})
    for csv in csv1list:
        df = pd.read_csv(os.path.join(SURGEON_DIR,csv), header=0)
        df['frame'] = df['frame'] + fc
        conc_df = pd.concat([conc_df,df])
        fc += nf
    conc_df.to_csv(os.path.join(SURGEON_DIR,'cam1_nms.csv'), index=False)

def log_write():
    exttime = time.localtime()
    csv1list = [file for file in os.listdir(os.path.abspath(SURGEON_DIR)) if file.endswith('1.csv')]
    with open (os.path.abspath(SURGEON_DIR+LOG_EXTRACT), "a") as log_extract:
        log_extract.write("\n[EXTRACT] EXTRACT %d svo files finishied at %04d/%02d/%02d %02d:%02d:%02d" % (len(csv1list)-1,exttime.tm_year, exttime.tm_mon, exttime.tm_mday, exttime.tm_hour, exttime.tm_min, exttime.tm_sec))

def main():        
    extract_surgeon()
    concat_csv()
    concat_csv_with_nms()    
    log_write()

if __name__ == '__main__':
    main()